Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella corporis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella corporis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella corporis
NCBI Strain Identifiers MJR7716
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000430525.1)
Genome Characteristics
CheckM Completeness 98.65%
CheckM Contamination 0.72%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 3
tRNA Count 17
Contig Count 288
N50 Contigs 54,775 bp
Longest Contig 224,201 bp
Scaffold Count 177
N50 Scaffolds 67,706 bp
Longest Scaffold 224,201 bp
Genome Size 2,859,509 bp
Protein Count 2,573
Coding Density 84.34%
GC Percentage 43.96%
Ambiguous Bases N/A
GTDB representative GCA_000430525.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154659v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03854413
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001546595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,512
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 111
Species Taxid 28128
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 28128
Total Gap Length 11100
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQG00000000.1