Peptoniphilus_A harei_A
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Tissierellales; f__Peptoniphilaceae; g__Peptoniphilus_A; s__Peptoniphilus_A harei_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Tissierellia; o__Tissierellales; f__Peptoniphilaceae; g__Peptoniphilus; s__Peptoniphilus harei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Tissierellia; o__Tissierellales; f__Peptoniphilaceae; g__Peptoniphilus; s__Peptoniphilus harei
NCBI Strain Identifiers CMW7756A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000183565.2)
Genome Characteristics
CheckM Completeness 99.3%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 50
N50 Contigs 111,465 bp
Longest Contig 314,892 bp
Scaffold Count 22
N50 Scaffolds 269,331 bp
Longest Scaffold 419,735 bp
Genome Size 1,874,365 bp
Protein Count 1,793
Coding Density 89.52%
GC Percentage 34.34%
Ambiguous Bases N/A
GTDB representative GCA_000183565.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154655v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03854408
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,800
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 28
Species Taxid 54005
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 54005
Total Gap Length 2800
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQE00000000.1