Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers MJR8396D
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 2
tRNA Count 17
Contig Count 163
N50 Contigs 78,963 bp
Longest Contig 204,575 bp
Scaffold Count 135
N50 Scaffolds 108,187 bp
Longest Scaffold 234,343 bp
Genome Size 5,401,484 bp
Protein Count 5,091
Coding Density 88.17%
GC Percentage 57.22%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154651v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03854350
Country None
Date 2016-02-02
Genbank Assembly Accession GCA_001546515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 5,353
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 28
Species Taxid 573
SSU Count 3
Submitter The Genome Institute at Washington University
Taxid 573
Total Gap Length 2800
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRQC00000000.1