Fusobacterium_C gonidiaformans
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium_C; s__Fusobacterium_C gonidiaformans
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium equinum
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium equinum
NCBI Strain Identifiers CMW8396
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003019695.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 117
N50 Contigs 47,315 bp
Longest Contig 175,471 bp
Scaffold Count 77
N50 Scaffolds 59,181 bp
Longest Scaffold 187,298 bp
Genome Size 1,797,919 bp
Protein Count 1,780
Coding Density 91.29%
GC Percentage 32.50%
Ambiguous Bases N/A
GTDB representative GCA_003019695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154639v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03850946
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 1,787
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 40
Species Taxid 134605
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 134605
Total Gap Length 4000
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPX00000000.1