Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter_B; s__Citrobacter_B koseri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter koseri
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter koseri
NCBI Strain Identifiers GED7778C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900446925.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 3
tRNA Count 18
Contig Count 126
N50 Contigs 70,079 bp
Longest Contig 272,914 bp
Scaffold Count 63
N50 Scaffolds 303,787 bp
Longest Scaffold 697,543 bp
Genome Size 4,812,175 bp
Protein Count 4,487
Coding Density 88.90%
GC Percentage 53.78%
Ambiguous Bases N/A
GTDB representative GCA_900446925.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154630v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842474
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 4,627
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 63
Species Taxid 545
SSU Count 2
Submitter The Genome Institute at Washington University
Taxid 545
Total Gap Length 6300
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPS00000000.1