Citrobacter freundii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter freundii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter freundii
NCBI Strain Identifiers GED7749C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900635425.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 43
N50 Contigs 174,437 bp
Longest Contig 406,564 bp
Scaffold Count 24
N50 Scaffolds 493,823 bp
Longest Scaffold 794,603 bp
Genome Size 4,927,776 bp
Protein Count 4,609
Coding Density 89.14%
GC Percentage 51.66%
Ambiguous Bases N/A
GTDB representative GCA_900635425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154628v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842472
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 4,750
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 19
Species Taxid 546
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 546
Total Gap Length 1900
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPR00000000.1