Bifidobacterium breve
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
NCBI Strain Identifiers GED8481
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001025175.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 50
N50 Contigs 78,124 bp
Longest Contig 264,812 bp
Scaffold Count 29
N50 Scaffolds 173,475 bp
Longest Scaffold 541,967 bp
Genome Size 2,358,436 bp
Protein Count 2,036
Coding Density 86.97%
GC Percentage 58.66%
Ambiguous Bases N/A
GTDB representative GCA_001025175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154623v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842221
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,044
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 21
Species Taxid 1685
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1685
Total Gap Length 2100
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPP00000000.1