Bacillus_E coagulans_A
Isolate HQ 16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_C; g__Bacillus_E; s__Bacillus_E coagulans_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus coagulans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus coagulans
NCBI Strain Identifiers GED7749B
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000169195.2)
Genome Characteristics
CheckM Completeness 99.78%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 16
Contig Count 213
N50 Contigs 37,885 bp
Longest Contig 166,985 bp
Scaffold Count 156
N50 Scaffolds 49,171 bp
Longest Scaffold 230,239 bp
Genome Size 3,312,432 bp
Protein Count 3,223
Coding Density 82.46%
GC Percentage 46.49%
Ambiguous Bases N/A
GTDB representative GCA_000169195.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154621v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842165
Country None
Date 2016-2-8
Genbank Assembly Accession GCA_001546215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 3,281
Refseq Category na
Seq Rel Date 2016/02/08
Spanned Gaps 57
Species Taxid 1398
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1398
Total Gap Length 5700
Translation Table 11
tRNA Count (total) 29
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPN00000000.1