Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Winkia; s__Winkia neuii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces neuii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Actinomyces; s__Actinomyces neuii
NCBI Strain Identifiers MJR8396A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000420405.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.95%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 45
N50 Contigs 280,633 bp
Longest Contig 430,770 bp
Scaffold Count 30
N50 Scaffolds 280,633 bp
Longest Scaffold 444,181 bp
Genome Size 2,344,907 bp
Protein Count 2,106
Coding Density 91.51%
GC Percentage 56.30%
Ambiguous Bases N/A
GTDB representative GCA_000420405.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154613v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03842029
Country None
Date 2016-2-2
Genbank Assembly Accession GCA_001546135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Vagina
Latitude Longitude None
Molecule Count N/A
CDS Count 2,068
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 15
Species Taxid 33007
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 33007
Total Gap Length 1500
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPJ00000000.1