Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D coli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter coli
NCBI Strain Identifiers ZJ2013CCHD50
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000254135.2)
Genome Characteristics
CheckM Completeness 99.72%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 121,955 bp
Longest Contig 252,747 bp
Scaffold Count 22
N50 Scaffolds 174,528 bp
Longest Scaffold 336,182 bp
Genome Size 1,674,367 bp
Protein Count 1,719
Coding Density 93.06%
GC Percentage 31.40%
Ambiguous Bases N/A
GTDB representative GCA_000254135.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154527v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03295190
Country China: Zhejiang Province
Date 2016-2-2
Genbank Assembly Accession GCA_001545275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken fecal material
Latitude Longitude 29.2 N 120.0 E
Molecule Count N/A
CDS Count 1,699
Refseq Category na
Seq Rel Date 2016/02/02
Spanned Gaps 16
Species Taxid 195
SSU Count 1
Submitter China CDC
Taxid 195
Total Gap Length 2762
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXTV00000000.1