Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia choica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia choica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia choica
NCBI Strain Identifiers LMG 22940
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 98.79%
CheckM Contamination 1.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 657
N50 Contigs 49,879 bp
Longest Contig 256,248 bp
Scaffold Count 657
N50 Scaffolds 49,879 bp
Longest Scaffold 256,248 bp
Genome Size 9,776,207 bp
Protein Count 9,299
Coding Density 83.59%
GC Percentage 62.65%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM1544535v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3731255
Country None
Date 2016-4-20
Genbank Assembly Accession GCA_001544535.2
Genome Category Isolate
Genome Representation full
Isolate LMG 22940
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 9,182
Refseq Category na
Seq Rel Date 2016/04/20
Spanned Gaps 0
Species Taxid 326476
SSU Count 1
Submitter LM-UGent
Taxid 326476
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FCON00000000.2