Caballeronia sordidicola_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia sordidicola_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia sordidicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Caballeronia; s__Caballeronia sordidicola
NCBI Strain Identifiers LMG 22029
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.18%
CheckM Contamination 2.65%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 72
N50 Contigs 237,006 bp
Longest Contig 731,501 bp
Scaffold Count 72
N50 Scaffolds 237,006 bp
Longest Scaffold 731,501 bp
Genome Size 6,874,511 bp
Protein Count 6,221
Coding Density 87.58%
GC Percentage 60.15%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Burkholderia sordidicola LMG 22029
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3731251
Country None
Date 2016-4-20
Genbank Assembly Accession GCA_001544455.2
Genome Category Isolate
Genome Representation full
Isolate LMG 22029
Isolation Source fungus
Latitude Longitude None
Molecule Count N/A
CDS Count 6,150
Refseq Category representative genome
Seq Rel Date 2016/04/20
Spanned Gaps 0
Species Taxid 196367
SSU Count 1
Submitter LM-UGent
Taxid 196367
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FCOC00000000.2