Enterococcus_A raffinosus
Isolate HQ 23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_A; s__Enterococcus_A raffinosus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus raffinosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus raffinosus; x__Enterococcus raffinosus NBRC 100492
NCBI Strain Identifiers NBRC 100492
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001886185.1)
Genome Characteristics
CheckM Completeness 99.31%
CheckM Contamination 3.71%
CheckM Strain Heterogeneity 7.14
5S Count 0
16S Count 0
23S Count 2
tRNA Count 20
Contig Count 144
N50 Contigs 65,725 bp
Longest Contig 225,195 bp
Scaffold Count 144
N50 Scaffolds 65,725 bp
Longest Scaffold 225,195 bp
Genome Size 4,210,362 bp
Protein Count 4,138
Coding Density 87.23%
GC Percentage 39.36%
Ambiguous Bases N/A
GTDB representative GCA_001886185.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154411v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00045732
Country None
Date 2016-1-26
Genbank Assembly Accession GCA_001544115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,096
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 0
Species Taxid 71452
SSU Count 2
Submitter National Institute of Technology and Evaluation
Taxid 1218093
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BCPU00000000.1