Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers H;D344RRF x C68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 292
N50 Contigs 27,299 bp
Longest Contig 109,677 bp
Scaffold Count 262
N50 Scaffolds 32,295 bp
Longest Scaffold 109,677 bp
Genome Size 3,135,350 bp
Protein Count 3,190
Coding Density 85.25%
GC Percentage 38.15%
Ambiguous Bases N/A
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154367v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04414040
Country USA: Rhode Island
Date 2016-2-1
Genbank Assembly Accession GCA_001543675.1
Genome Category Isolate
Genome Representation full
Isolate H
Isolation Source laboratory strain
Latitude Longitude None
Molecule Count N/A
CDS Count 3,306
Refseq Category na
Seq Rel Date 2016/02/01
Spanned Gaps 30
Species Taxid 1352
SSU Count 3
Submitter brown University/Rhode Island Hospital
Taxid 1352
Total Gap Length 2295
Translation Table 11
tRNA Count (total) 65
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRAY00000000.1