Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers D;D344RRF x C68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 230
N50 Contigs 33,387 bp
Longest Contig 114,406 bp
Scaffold Count 201
N50 Scaffolds 35,834 bp
Longest Scaffold 137,964 bp
Genome Size 3,024,477 bp
Protein Count 3,058
Coding Density 85.64%
GC Percentage 38.09%
Ambiguous Bases 3
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154357v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04390121
Country USA: Rhode Island
Date 2016-2-1
Genbank Assembly Accession GCA_001543575.1
Genome Category Isolate
Genome Representation full
Isolate D
Isolation Source laboratory strain
Latitude Longitude None
Molecule Count N/A
CDS Count 3,170
Refseq Category na
Seq Rel Date 2016/02/01
Spanned Gaps 29
Species Taxid 1352
SSU Count 3
Submitter brown University/Rhode Island Hospital
Taxid 1352
Total Gap Length 2066
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRAU00000000.1