Cupriavidus metallidurans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Cupriavidus; s__Cupriavidus metallidurans
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Cupriavidus; s__Cupriavidus metallidurans
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Cupriavidus; s__Cupriavidus metallidurans
NCBI Strain Identifiers NDB3NO24
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000196015.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 38
N50 Contigs 588,091 bp
Longest Contig 1,391,648 bp
Scaffold Count 38
N50 Scaffolds 588,091 bp
Longest Scaffold 1,391,648 bp
Genome Size 6,541,533 bp
Protein Count 6,035
Coding Density 88.50%
GC Percentage 63.81%
Ambiguous Bases N/A
GTDB representative GCA_000196015.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154345v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04357041
Country Australia: Queensland; Roma
Date 2016-2-1
Genbank Assembly Accession GCA_001543455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water sample collected from a newly drilled coal seam bore well (65 hours after drilling)
Latitude Longitude 26.556920704207474 S 148.76843266189098 E
Molecule Count N/A
CDS Count 6,040
Refseq Category na
Seq Rel Date 2016/02/01
Spanned Gaps 0
Species Taxid 119219
SSU Count 1
Submitter Griffith University
Taxid 119219
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQAD00000000.1