Pseudomonas_E sp000346225
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp000346225
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas fragi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas chlororaphis group; s__Pseudomonas fragi
NCBI Strain Identifiers P121
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000346225.2)
Genome Characteristics
CheckM Completeness 99.61%
CheckM Contamination 0.78%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 5,101,809 bp
Longest Contig 5,101,809 bp
Scaffold Count 1
N50 Scaffolds 5,101,809 bp
Longest Scaffold 5,101,809 bp
Genome Size 5,101,809 bp
Protein Count 4,666
Coding Density 88.04%
GC Percentage 58.63%
Ambiguous Bases N/A
GTDB representative GCA_000346225.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM154326v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04371283
Country None
Date 2016-2-1
Genbank Assembly Accession GCA_001543265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sediment of Arctic
Latitude Longitude 73.11 N 115 E
Molecule Count 1
CDS Count 4,546
Refseq Category na
Seq Rel Date 2016/02/01
Spanned Gaps 0
Species Taxid 296
SSU Count 5
Submitter Nanjing Normal university
Taxid 296
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None