Streptococcus salivarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers JF
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.8%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 50.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1
N50 Contigs 2,191,044 bp
Longest Contig 2,191,044 bp
Scaffold Count 1
N50 Scaffolds 2,191,044 bp
Longest Scaffold 2,191,044 bp
Genome Size 2,191,044 bp
Protein Count 1,987
Coding Density 87.31%
GC Percentage 40.19%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM154308v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04395122
Country China: Xintai
Date 2016-2-1
Genbank Assembly Accession GCA_001543085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral
Latitude Longitude None
Molecule Count 1
Protein Count 1,983
Refseq Category na
Seq Rel Date 2016/02/01
Spanned Gaps 0
Species Taxid 1304
SSU Count 8
Submitter Xintai People Hospital
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None