Bacillus_X simplex_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_A; g__Bacillus_X; s__Bacillus_X simplex_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus simplex
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus simplex
NCBI Strain Identifiers VanAntwerpen02
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.91%
CheckM Contamination 1.17%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 5
23S Count 2
tRNA Count 20
Contig Count 111
N50 Contigs 125,262 bp
Longest Contig 322,970 bp
Scaffold Count 59
N50 Scaffolds 162,255 bp
Longest Scaffold 813,395 bp
Genome Size 5,115,479 bp
Protein Count 4,982
Coding Density 82.74%
GC Percentage 42.79%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154291v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274566
Country USA:Oklahoma
Date 2016-1-29
Genbank Assembly Accession GCA_001542915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tree Bark
Latitude Longitude None
Molecule Count N/A
CDS Count 4,915
Refseq Category na
Seq Rel Date 2016/01/29
Spanned Gaps 52
Species Taxid 1478
SSU Count 8
Submitter Oklahoma State Universtiy
Taxid 1478
Total Gap Length 5793
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNNH00000000.1