Enterococcus_B faecium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_B; s__Enterococcus_B faecium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus faecium
NCBI Strain Identifiers 87056200
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001544255.1)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 141
N50 Contigs 42,332 bp
Longest Contig 145,658 bp
Scaffold Count 116
N50 Scaffolds 50,143 bp
Longest Scaffold 146,626 bp
Genome Size 2,866,232 bp
Protein Count 2,793
Coding Density 84.91%
GC Percentage 38.09%
Ambiguous Bases 290
GTDB representative GCA_001544255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154289v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04266627
Country Sweden: Gaevle
Date 2016-1-29
Genbank Assembly Accession GCA_001542895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude 60.41 N 17.899999999999977 E
Molecule Count N/A
CDS Count 2,928
Refseq Category na
Seq Rel Date 2016/01/29
Spanned Gaps 25
Species Taxid 1352
SSU Count 2
Submitter Uppsala University
Taxid 1352
Total Gap Length 7379
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNDL00000000.1