Stenotrophomonas maltophilia
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers PG157
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900186865.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 5.24%
CheckM Strain Heterogeneity 86.84
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 76
N50 Contigs 144,111 bp
Longest Contig 459,235 bp
Scaffold Count 76
N50 Scaffolds 144,111 bp
Longest Scaffold 459,235 bp
Genome Size 4,949,420 bp
Protein Count 4,555
Coding Density 89.10%
GC Percentage 66.50%
Ambiguous Bases N/A
GTDB representative GCA_900186865.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154239v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04260440
Country Slovenia:Golnik
Date 2016-1-28
Genbank Assembly Accession GCA_001542395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source perineum
Latitude Longitude 46.33 N 14.330000000000041 E
Molecule Count N/A
CDS Count 4,572
Refseq Category na
Seq Rel Date 2016/01/28
Spanned Gaps 0
Species Taxid 40324
SSU Count 1
Submitter Universitat Autonoma de Barcelona
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 75
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNIW00000000.1