Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Kentucky
NCBI Strain Identifiers CFSAN011777
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.17%
CheckM Strain Heterogeneity 6.25
5S Count 3
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 248
N50 Contigs 332,848 bp
Longest Contig 670,681 bp
Scaffold Count 248
N50 Scaffolds 332,848 bp
Longest Scaffold 670,681 bp
Genome Size 4,894,227 bp
Protein Count 4,686
Coding Density 87.25%
GC Percentage 51.98%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154213v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03275160
Country USA: PA
Date 2016-1-27
Genbank Assembly Accession GCA_001542135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Fecal
Latitude Longitude None
Molecule Count N/A
CDS Count 4,961
Refseq Category na
Seq Rel Date 2016/01/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 13
Submitter FDA/CFSAN
Taxid 192955
Total Gap Length 0
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOBH00000000.1