Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Kentucky
NCBI Strain Identifiers CFSAN011776
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.92%
CheckM Strain Heterogeneity 5.88
5S Count 1
16S Count 4
23S Count 7
tRNA Count 20
Contig Count 192
N50 Contigs 407,226 bp
Longest Contig 689,788 bp
Scaffold Count 192
N50 Scaffolds 407,226 bp
Longest Scaffold 689,788 bp
Genome Size 4,862,412 bp
Protein Count 4,639
Coding Density 87.44%
GC Percentage 51.97%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154209v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03275159
Country USA: PA
Date 2016-1-27
Genbank Assembly Accession GCA_001542095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Fecal
Latitude Longitude None
Molecule Count N/A
CDS Count 4,900
Refseq Category na
Seq Rel Date 2016/01/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 5
Submitter FDA/CFSAN
Taxid 192955
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOBG00000000.1