Xanthomonas translucens
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Xanthomonas; s__Xanthomonas translucens
NCBI Strain Identifiers B1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000331775.1)
Genome Characteristics
CheckM Completeness 96.55%
CheckM Contamination 15.52%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 523
N50 Contigs 18,487 bp
Longest Contig 86,537 bp
Scaffold Count 514
N50 Scaffolds 18,545 bp
Longest Scaffold 86,537 bp
Genome Size 4,801,825 bp
Protein Count 4,456
Coding Density 85.79%
GC Percentage 67.62%
Ambiguous Bases N/A
GTDB representative GCA_000331775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154204v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04279072
Country USA: North Dakota
Date 2016-1-27
Genbank Assembly Accession GCA_001542045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,387
Refseq Category na
Seq Rel Date 2016/01/27
Spanned Gaps 9
Species Taxid 343
SSU Count 1
Submitter Kansas State University
Taxid 343
Total Gap Length 900
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNTA00000000.1