Salmonella enterica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Tennessee
NCBI Strain Identifiers CFSAN001369
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.28%
CheckM Strain Heterogeneity 12.5
5S Count 6
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 236
N50 Contigs 46,347 bp
Longest Contig 205,665 bp
Scaffold Count 236
N50 Scaffolds 46,347 bp
Longest Scaffold 205,665 bp
Genome Size 4,782,897 bp
Protein Count 4,683
Coding Density 87.55%
GC Percentage 52.16%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154197v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02261200
Country USA: GA
Date 2016-01-27
Genbank Assembly Accession GCA_001541975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Environmental
Latitude Longitude None
Molecule Count N/A
CDS Count 4,925
Refseq Category na
Seq Rel Date 2016/01/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 1
Submitter Washington State Department of Health Public Health Laboratory
Taxid 143221
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRPF00000000.1