Acinetobacter baumannii
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; x__Acinetobacter calcoaceticus/baumannii complex; s__Acinetobacter baumannii
NCBI Strain Identifiers AbMDR-GLH11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002811175.1)
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 1.48%
CheckM Strain Heterogeneity 82.61
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 350
N50 Contigs 26,333 bp
Longest Contig 86,885 bp
Scaffold Count 347
N50 Scaffolds 26,333 bp
Longest Scaffold 86,885 bp
Genome Size 3,921,032 bp
Protein Count 3,877
Coding Density 88.71%
GC Percentage 39.16%
Ambiguous Bases 8
GTDB representative GCA_002811175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154179v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04005095
Country Spain: Seville
Date 2016-1-26
Genbank Assembly Accession GCA_001541795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tracheobronchial aspirate
Latitude Longitude 37.361937 N 5.980480 W
Molecule Count N/A
CDS Count 3,843
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 3
Species Taxid 470
SSU Count 1
Submitter Institute of Biomedicine of Seville (IBiS)
Taxid 470
Total Gap Length 430
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJAI00000000.1