Levilactobacillus brevis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Levilactobacillus; s__Levilactobacillus brevis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brevis
NCBI Strain Identifiers D6
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001433855.1)
Genome Characteristics
CheckM Completeness 99.06%
CheckM Contamination 0.62%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 123
N50 Contigs 78,576 bp
Longest Contig 167,250 bp
Scaffold Count 123
N50 Scaffolds 78,576 bp
Longest Scaffold 167,250 bp
Genome Size 2,591,675 bp
Protein Count 2,684
Coding Density 85.56%
GC Percentage 45.59%
Ambiguous Bases N/A
GTDB representative GCA_001433855.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 1153
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04387838
Country Croatia
Date 2016-1-26
Genbank Assembly Accession GCA_001541605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Cheese
Latitude Longitude None
Molecule Count N/A
CDS Count 2,646
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 0
Species Taxid 1580
SSU Count 3
Submitter Helsinki University
Taxid 1580
Total Gap Length 0
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQNG00000000.1