Acinetobacter baumannii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; s__Acinetobacter baumannii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Acinetobacter; x__Acinetobacter calcoaceticus/baumannii complex; s__Acinetobacter baumannii
NCBI Strain Identifiers AbMDR-GLH3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002811175.1)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 0.61%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 19
Contig Count 183
N50 Contigs 47,398 bp
Longest Contig 222,167 bp
Scaffold Count 180
N50 Scaffolds 47,748 bp
Longest Scaffold 222,167 bp
Genome Size 3,949,779 bp
Protein Count 3,827
Coding Density 87.76%
GC Percentage 39.06%
Ambiguous Bases 3
GTDB representative GCA_002811175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM154142v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04005087
Country Spain: Seville
Date 2016-1-26
Genbank Assembly Accession GCA_001541425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tracheobronchial aspirate
Latitude Longitude 37.361937 N 5.980480 W
Molecule Count N/A
CDS Count 3,804
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 3
Species Taxid 470
SSU Count 5
Submitter Institute of Biomedicine of Seville (IBiS)
Taxid 470
Total Gap Length 401
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJAA00000000.1