Vibrio toranzoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio toranzoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio toranzoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio toranzoniae
NCBI Strain Identifiers Vb 10.8
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_900089765.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 18
23S Count 21
tRNA Count 20
Contig Count 165
N50 Contigs 221,494 bp
Longest Contig 645,319 bp
Scaffold Count 165
N50 Scaffolds 221,494 bp
Longest Scaffold 645,319 bp
Genome Size 4,537,316 bp
Protein Count 3,996
Coding Density 84.87%
GC Percentage 43.93%
Ambiguous Bases N/A
GTDB representative GCA_900089765.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM154133v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155649
Country Spain: Galicia
Date 2016-1-26
Genbank Assembly Accession GCA_001541335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Reared clam
Latitude Longitude None
Molecule Count N/A
CDS Count 3,992
Refseq Category na
Seq Rel Date 2016/01/26
Spanned Gaps 0
Species Taxid 1194427
SSU Count 17
Submitter Universidad de Santiago de Compostela
Taxid 1194427
Total Gap Length 0
Translation Table 11
tRNA Count (total) 94
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LMXU00000000.1