Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhimurium
NCBI Strain Identifiers SO4698-09
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 5,037,238 bp
Longest Contig 5,037,238 bp
Scaffold Count 1
N50 Scaffolds 5,037,238 bp
Longest Scaffold 5,037,238 bp
Genome Size 5,037,238 bp
Protein Count 4,761
Coding Density 87.40%
GC Percentage 52.17%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name SO4698_09
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3506109
Country None
Date 2016-1-22
Genbank Assembly Accession GCA_001540845.1
Genome Category Isolate
Genome Representation full
Isolate SO4698-09
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 5,079
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter INSTITUTE OF FOOD RESEARCH
Taxid 90371
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None