Bacteroides stercoris
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides stercoris
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides stercoris
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Bacteroides; s__Bacteroides stercoris
NCBI Strain Identifiers CL09T03C01
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000154525.1)
Genome Characteristics
CheckM Completeness 99.26%
CheckM Contamination 2.4%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 9
23S Count 16
tRNA Count 20
Contig Count 158
N50 Contigs 118,684 bp
Longest Contig 408,337 bp
Scaffold Count 117
N50 Scaffolds 271,166 bp
Longest Scaffold 433,644 bp
Genome Size 3,858,676 bp
Protein Count 3,318
Coding Density 89.88%
GC Percentage 45.56%
Ambiguous Bases N/A
GTDB representative GCA_000154525.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM153560v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03653591
Country USA:Boston
Date 2016-01-25
Genbank Assembly Accession GCA_001535605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fecal sample
Latitude Longitude None
Molecule Count N/A
CDS Count 3,231
Refseq Category na
Seq Rel Date 2016/01/25
Spanned Gaps 41
Species Taxid 46506
SSU Count 10
Submitter Brigham & Women's Hospital
Taxid 46506
Total Gap Length 1162
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LRGC00000000.1