Pseudomonas_E monteilii_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E monteilii_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas monteilii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas putida group; s__Pseudomonas monteilii
NCBI Strain Identifiers USDA-ARS-USMARC-56711
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.62%
CheckM Strain Heterogeneity 25.0
5S Count 6
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 4,714,359 bp
Longest Contig 4,714,359 bp
Scaffold Count 1
N50 Scaffolds 4,714,359 bp
Longest Scaffold 4,714,359 bp
Genome Size 4,714,359 bp
Protein Count 4,037
Coding Density 86.76%
GC Percentage 64.36%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM153474v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158505
Country USA:Kansas
Date 2016-1-25
Genbank Assembly Accession GCA_001534745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nasopharynx
Latitude Longitude None
Molecule Count 1
CDS Count 4,003
Refseq Category representative genome
Seq Rel Date 2016/01/25
Spanned Gaps 0
Species Taxid 76759
SSU Count 7
Submitter USDA-ARS-USMARC
Taxid 76759
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None