Burkholderia diffusa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia diffusa
NCBI Strain Identifiers MSMB583WGS
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718315.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 99
N50 Contigs 173,479 bp
Longest Contig 717,221 bp
Scaffold Count 99
N50 Scaffolds 173,479 bp
Longest Scaffold 717,221 bp
Genome Size 6,778,484 bp
Protein Count 6,069
Coding Density 86.65%
GC Percentage 66.37%
Ambiguous Bases N/A
GTDB representative GCA_001718315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM153318v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449606
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001533185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,202
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 488732
SSU Count 1
Submitter Northern Arizona University
Taxid 488732
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPKA00000000.1