Burkholderia stagnalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia stagnalis
NCBI Strain Identifiers MSMB653WGS
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718955.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 97
N50 Contigs 258,574 bp
Longest Contig 648,606 bp
Scaffold Count 97
N50 Scaffolds 258,574 bp
Longest Scaffold 648,606 bp
Genome Size 7,527,444 bp
Protein Count 6,702
Coding Density 87.64%
GC Percentage 67.73%
Ambiguous Bases N/A
GTDB representative GCA_001718955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM153290v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449620
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001532905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,818
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 1503054
SSU Count 1
Submitter Northern Arizona University
Taxid 1503054
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPKN00000000.1