Burkholderia cepacia
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia cepacia
NCBI Strain Identifiers MSMB1224WGS
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001411495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 72
N50 Contigs 242,091 bp
Longest Contig 851,428 bp
Scaffold Count 72
N50 Scaffolds 242,091 bp
Longest Scaffold 851,428 bp
Genome Size 8,449,153 bp
Protein Count 7,597
Coding Density 86.83%
GC Percentage 66.86%
Ambiguous Bases N/A
GTDB representative GCA_001411495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM153187v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449555
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001531875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 7,774
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 292
SSU Count 1
Submitter Northern Arizona University
Taxid 292
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPID00000000.1