Streptomyces amritsarensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces amritsarensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. IMTB 1903
NCBI Strain Identifiers IMTB 1903
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001953875.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.74%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 68
N50 Contigs 235,649 bp
Longest Contig 658,710 bp
Scaffold Count 65
N50 Scaffolds 239,045 bp
Longest Scaffold 658,710 bp
Genome Size 7,846,227 bp
Protein Count 7,070
Coding Density 87.41%
GC Percentage 72.59%
Ambiguous Bases 122
GTDB representative GCA_001953875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM153114v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04387707
Country India: Assam; Kaziranga
Date 2016-01-22
Genbank Assembly Accession GCA_001531145.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Field soil sample
Latitude Longitude None
Molecule Count N/A
CDS Count 7,082
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 3
Species Taxid 1776680
SSU Count 1
Submitter Institute of Microbial Technology
Taxid 1776680
Total Gap Length 104
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LQYB00000000.1