Burkholderia ubonensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia ubonensis
NCBI Strain Identifiers MSMB1343WGS
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959245.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 3.53%
CheckM Strain Heterogeneity 60.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 120
N50 Contigs 168,119 bp
Longest Contig 422,348 bp
Scaffold Count 120
N50 Scaffolds 168,119 bp
Longest Scaffold 422,348 bp
Genome Size 7,207,745 bp
Protein Count 6,374
Coding Density 87.55%
GC Percentage 67.49%
Ambiguous Bases N/A
GTDB representative GCA_000959245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152960v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449476
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001529605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,476
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 101571
SSU Count 1
Submitter Northern Arizona University
Taxid 101571
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPFC00000000.1