Burkholderia vietnamiensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia vietnamiensis
NCBI Strain Identifiers AU21726
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 108
N50 Contigs 177,957 bp
Longest Contig 801,247 bp
Scaffold Count 108
N50 Scaffolds 177,957 bp
Longest Scaffold 801,247 bp
Genome Size 7,052,954 bp
Protein Count 6,320
Coding Density 85.74%
GC Percentage 66.97%
Ambiguous Bases N/A
GTDB representative GCA_000959445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152958v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449405
Country USA
Date 2016-1-22
Genbank Assembly Accession GCA_001529585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Non-CF Ovarian cyst
Latitude Longitude None
Molecule Count N/A
CDS Count 6,445
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 60552
SSU Count 1
Submitter Northern Arizona University
Taxid 60552
Total Gap Length 0
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPCN00000000.1