Pseudomonas_E weihenstephanensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E weihenstephanensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. TAD18
NCBI Strain Identifiers TAD18
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001043055.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 4
23S Count 2
tRNA Count 20
Contig Count 82
N50 Contigs 230,252 bp
Longest Contig 687,984 bp
Scaffold Count 82
N50 Scaffolds 230,252 bp
Longest Scaffold 687,984 bp
Genome Size 4,917,586 bp
Protein Count 4,403
Coding Density 89.36%
GC Percentage 57.24%
Ambiguous Bases N/A
GTDB representative GCA_001043055.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152930v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04166965
Country Antarctica
Date 2016-1-22
Genbank Assembly Accession GCA_001529305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine algae
Latitude Longitude None
Molecule Count N/A
CDS Count 4,355
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 1729583
SSU Count 5
Submitter University of Florence
Taxid 1729583
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LLWI00000000.1