Burkholderia ubonensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia ubonensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia ubonensis
NCBI Strain Identifiers MSMB1220WGS
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959245.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.21%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 108
N50 Contigs 211,806 bp
Longest Contig 468,184 bp
Scaffold Count 108
N50 Scaffolds 211,806 bp
Longest Scaffold 468,184 bp
Genome Size 7,586,630 bp
Protein Count 6,837
Coding Density 87.55%
GC Percentage 67.28%
Ambiguous Bases N/A
GTDB representative GCA_000959245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152923v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449457
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001529235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,923
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 101571
SSU Count 1
Submitter Northern Arizona University
Taxid 101571
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPEJ00000000.1