Burkholderia vietnamiensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia vietnamiensis
NCBI Strain Identifiers AU25004
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 105
N50 Contigs 153,998 bp
Longest Contig 415,118 bp
Scaffold Count 105
N50 Scaffolds 153,998 bp
Longest Scaffold 415,118 bp
Genome Size 6,883,433 bp
Protein Count 6,148
Coding Density 85.71%
GC Percentage 66.95%
Ambiguous Bases N/A
GTDB representative GCA_000959445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152852v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449406
Country USA
Date 2016-1-22
Genbank Assembly Accession GCA_001528525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Non-CF Lymph node
Latitude Longitude None
Molecule Count N/A
CDS Count 6,257
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 60552
SSU Count 1
Submitter Northern Arizona University
Taxid 60552
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LPCO00000000.1