Burkholderia stagnalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia stagnalis
NCBI Strain Identifiers MSMB1966
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718955.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.47%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 101
N50 Contigs 223,792 bp
Longest Contig 482,476 bp
Scaffold Count 101
N50 Scaffolds 223,792 bp
Longest Scaffold 482,476 bp
Genome Size 7,602,169 bp
Protein Count 6,773
Coding Density 87.69%
GC Percentage 67.69%
Ambiguous Bases N/A
GTDB representative GCA_001718955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152764v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449328
Country Papua New Guinea
Date 2016-1-22
Genbank Assembly Accession GCA_001527645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 6,863
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 1503054
SSU Count 1
Submitter Northern Arizona University
Taxid 1503054
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOZS00000000.1