Burkholderia stagnalis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia stagnalis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia stagnalis
NCBI Strain Identifiers MSMB1543
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718955.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.28%
CheckM Strain Heterogeneity 9.09
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 84
N50 Contigs 267,329 bp
Longest Contig 579,983 bp
Scaffold Count 84
N50 Scaffolds 267,329 bp
Longest Scaffold 579,983 bp
Genome Size 7,589,540 bp
Protein Count 6,701
Coding Density 87.67%
GC Percentage 67.73%
Ambiguous Bases N/A
GTDB representative GCA_001718955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152758v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449325
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001527585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,825
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 1503054
SSU Count 1
Submitter Northern Arizona University
Taxid 1503054
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOZP00000000.1