Agrobacterium deltaense
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Agrobacterium; s__Agrobacterium deltaense
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Agrobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Agrobacterium; s__Agrobacterium sp. TS45
NCBI Strain Identifiers TS45
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002943835.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.8%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 55
N50 Contigs 287,432 bp
Longest Contig 971,856 bp
Scaffold Count 55
N50 Scaffolds 287,432 bp
Longest Scaffold 971,856 bp
Genome Size 5,642,461 bp
Protein Count 5,377
Coding Density 88.39%
GC Percentage 59.82%
Ambiguous Bases N/A
GTDB representative GCA_002943835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152652v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04395164
Country China: Hubei Province; Huangshi City
Date 2016-1-22
Genbank Assembly Accession GCA_001526525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil sample from arsenic pollution region
Latitude Longitude None
Molecule Count N/A
CDS Count 5,390
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 477197
SSU Count 1
Submitter Huazhong Agricultural University
Taxid 477197
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ASYC00000000.1