Burkholderia cepacia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia cepacia
NCBI Strain Identifiers MSMB1820
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001411495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 88
N50 Contigs 215,484 bp
Longest Contig 449,310 bp
Scaffold Count 88
N50 Scaffolds 215,484 bp
Longest Scaffold 449,310 bp
Genome Size 8,276,276 bp
Protein Count 7,447
Coding Density 86.68%
GC Percentage 67.04%
Ambiguous Bases N/A
GTDB representative GCA_001411495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152625v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449294
Country Australia: Northern Territory
Date 2016-1-22
Genbank Assembly Accession GCA_001526255.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 7,593
Refseq Category na
Seq Rel Date 2016/01/22
Spanned Gaps 0
Species Taxid 292
SSU Count 1
Submitter Northern Arizona University
Taxid 292
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOYK00000000.1