Burkholderia diffusa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia diffusa
NCBI Strain Identifiers MSMB1060
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718315.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 66.67
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 58
N50 Contigs 263,566 bp
Longest Contig 860,836 bp
Scaffold Count 58
N50 Scaffolds 263,566 bp
Longest Scaffold 860,836 bp
Genome Size 6,811,070 bp
Protein Count 6,095
Coding Density 86.79%
GC Percentage 66.48%
Ambiguous Bases N/A
GTDB representative GCA_001718315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152470v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449284
Country Australia: Northern Territory
Date 2016-1-21
Genbank Assembly Accession GCA_001524705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,223
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 488732
SSU Count 1
Submitter Northern Arizona University
Taxid 488732
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOYB00000000.1