Burkholderia diffusa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia diffusa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia diffusa
NCBI Strain Identifiers MSMB0010
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001718315.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 25.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 71
N50 Contigs 273,239 bp
Longest Contig 520,308 bp
Scaffold Count 71
N50 Scaffolds 273,239 bp
Longest Scaffold 520,308 bp
Genome Size 6,793,702 bp
Protein Count 6,131
Coding Density 87.11%
GC Percentage 66.54%
Ambiguous Bases N/A
GTDB representative GCA_001718315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152438v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449263
Country Australia: Northern Territory
Date 2016-1-21
Genbank Assembly Accession GCA_001524385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water
Latitude Longitude 19.49 S 132.55 E
Molecule Count N/A
CDS Count 6,259
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 488732
SSU Count 2
Submitter Northern Arizona University
Taxid 488732
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOXI00000000.1