Burkholderia vietnamiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia vietnamiensis
NCBI Strain Identifiers FL-2-2-10-S1-D0
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 129
N50 Contigs 109,066 bp
Longest Contig 288,420 bp
Scaffold Count 129
N50 Scaffolds 109,066 bp
Longest Scaffold 288,420 bp
Genome Size 6,730,926 bp
Protein Count 5,949
Coding Density 85.76%
GC Percentage 67.31%
Ambiguous Bases N/A
GTDB representative GCA_000959445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152375v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449228
Country USA: Brevard; FL
Date 2016-1-21
Genbank Assembly Accession GCA_001523755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 28.5894038385174 N 80.8735048333362 W
Molecule Count N/A
CDS Count 6,053
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 60552
SSU Count 2
Submitter Northern Arizona University
Taxid 60552
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOWH00000000.1