Burkholderia vietnamiensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia vietnamiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia vietnamiensis
NCBI Strain Identifiers LA-5-5-30-S1-D2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000959445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 147
N50 Contigs 114,163 bp
Longest Contig 275,536 bp
Scaffold Count 147
N50 Scaffolds 114,163 bp
Longest Scaffold 275,536 bp
Genome Size 7,058,922 bp
Protein Count 6,349
Coding Density 85.90%
GC Percentage 66.96%
Ambiguous Bases N/A
GTDB representative GCA_000959445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152353v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449216
Country USA: New Orleans; St. John the Baptist; LA
Date 2016-1-21
Genbank Assembly Accession GCA_001523535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 30.1077445303183 N 90.4349881015097 W
Molecule Count N/A
CDS Count 6,460
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 60552
SSU Count 1
Submitter Northern Arizona University
Taxid 60552
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOVY00000000.1