Burkholderia cepacia
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia cepacia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__Burkholderia cepacia complex; s__Burkholderia cepacia
NCBI Strain Identifiers INT3-BP108
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001411495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 134
N50 Contigs 291,182 bp
Longest Contig 688,010 bp
Scaffold Count 134
N50 Scaffolds 291,182 bp
Longest Scaffold 688,010 bp
Genome Size 8,695,473 bp
Protein Count 7,887
Coding Density 86.11%
GC Percentage 66.51%
Ambiguous Bases N/A
GTDB representative GCA_001411495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM152278v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03449167
Country Thailand: Ubon
Date 2016-1-21
Genbank Assembly Accession GCA_001522785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 15.42 N 104.95 E
Molecule Count N/A
CDS Count 8,022
Refseq Category na
Seq Rel Date 2016/01/21
Spanned Gaps 0
Species Taxid 292
SSU Count 1
Submitter Northern Arizona University
Taxid 292
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LOUF00000000.1